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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV81380.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | NAC | ||||||||
| Protein Properties | Length: 270aa MW: 30158.7 Da PI: 9.2753 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 94.6 | 1.6e-29 | 1 | 69 | 59 | 128 |
NAM 59 yfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
yfFs++d+ky+tg+r+nrat +g+Wkatg+dk + + + e +g++ktLvfy+grap+g+ktdW+mheyrl
RWV81380.1 1 YFFSHKDRKYPTGSRTNRATGAGFWKATGRDKCIRN-SYERIGMRKTLVFYRGRAPHGQKTDWIMHEYRL 69
9**********************************9.8899***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 270 aa Download sequence |
YFFSHKDRKY PTGSRTNRAT GAGFWKATGR DKCIRNSYER IGMRKTLVFY RGRAPHGQKT 60 DWIMHEYRLD DSDDARGGGS VGPFHLYRFM LACSSRSDLP LLVLQDEGWV VCRVSKKKCF 120 FKGSGEGRTS QATENHVSIA ASHDRSPSLS SHYVHPNLGH HHRHLHHHNG LYHSQMPTGS 180 YSHGQVQDLM TNHRPSGYDF GVIPGDSAPI VKPYDGALAA AAACVGMQSE RDPGPNEWAV 240 LDGITAQQQQ QMNQMGSQRG GEMDLWGYGK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G10350.1 | 2e-51 | NAC family protein | ||||




