PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV81508.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 90aa MW: 10521.4 Da PI: 10.2063

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV81508.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	35	58	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 +kC+ C+k s+ + H H RWV81508.1 35 FKCHVCHKKLSTAGGMAIHVLQvH 58 89***********99999987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 90 aa Download sequence
MGKKKKRPSK MWCYYCDREF DDEKILVQHQ KAKHFKCHVC HKKLSTAGGM AIHVLQVHKE 60 TVTKYVPSFP FQVSIVSKSL NLRYTDGFGF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	3	33	KKKKRPSKMWCYYCDREFDDEKILVQHQKAK
2	4	34	KKKKRPSKMWCYYCDREFDDEKILVQHQKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30970.1	7e-40	C2H2 family protein