PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV81571.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 276aa MW: 31000 Da PI: 5.4618

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV81571.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	78.2	1.9e-24	17	157	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkklelee.v.ikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 +G+ F Ptd+el+ + L +k+ + +l++ i+e+++yk Pw+L + ++ + e y F++ +++a+++r +r+t g W a gk +++ ++ RWV81571.1 17 VGCYFAPTDQELIGDCLLNKICNLPLRVPPgYsIPEMEVYKKPPWELMVRSSSsylPTGEFYCFVRVPRSKARDNRLRRKTGGGSWVANGKPRNIPHQd 115 69*********************66633224**********84333322244499*******************************984 PP NAM 96 .kgelvglkktLvfy.......kgrapkge.ktdWvmheyrl 128 + + g++++L f+ k+++++g+ +W+mheyrl RWV81571.1 116 rRVAIAGTRRSLKFFkdsddprKKNQKDGSlGLNWIMHEYRL 157 344459*****7666554334444433679****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MASKETSDGG DESWRWVGCY FAPTDQELIG DCLLNKICNL PLRVPPGYSI PEMEVYKKPP 60 WELMVRSSSS YLPTGEFYCF VRVPRSKARD NRLRRKTGGG SWVANGKPRN IPHQDRRVAI 120 AGTRRSLKFF KDSDDPRKKN QKDGSLGLNW IMHEYRLHPS LYETIPSYET EEIILCRIQH 180 KGRGAADKSD GDSLPAMALP SVADTQETPE PWMAAGPSTQ RMAIDVPGCS SKPLAAVPKA 240 CTYDDDFYKF LDDLDVNLDF DLDLDIDTSR DPGCDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.1	4e-19	NAC family protein