PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV81716.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 424aa    MW: 46850.1 Da    PI: 6.8385
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV81716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox47.23.7e-151391856
                HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +F+++++p++++r eL+++l L+ rqVk+WFqNrR+++k
  RWV81716.1  1 MFKECPHPDEKQRLELSRRLCLESRQVKFWFQNRRTQMK 39
                69**********************************998 PP
2START26.51.4e-09222299169
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCG CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddk 69 
                 ela++a++el+++a+ eep+W+  s    + +n++ ++++f +  +     +  ea+r++++v  +++ lve+l+d++
  RWV81716.1 222 ELALAAMEELMSMAQMEEPLWFPCSqdgpKALNYEQYRRTFRPIPGispvgSVPEASRETRIVSITSVALVETLMDSA 299
                 5899*********************99*9************8855599999999*********************987 PP
3START114.81.3e-3629840795206
                 EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHH CS
       START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaeg 192
                 +ael +lsplv+ R++ f+R+++q+ +g+w++vdv+vd  +      s++ +++lpSg+l++++++g+skvtwveh+++++ ++h l+r+l++sg+a+g
  RWV81716.1 298 SAELHVLSPLVAvREVSFLRFCKQHAEGVWAVVDVAVDGIRADL---SSASCRRLPSGCLVQDMPDGYSKVTWVEHAEYDEGQVHHLYRPLLRSGQAFG 393
                 68999**********************************99965...6777779********************************************* PP

                 HHHHHHHTXXXXXX CS
       START 193 aktwvatlqrqcek 206
                 a +wvatlqrqce+
  RWV81716.1 394 AGRWVATLQRQCEC 407
                 ************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MFKECPHPDE KQRLELSRRL CLESRQVKFW FQNRRTQMKV GTLRDTQILS LLLGLRFPLE  60
FMLVDGLQTQ LERCENALLR QMNEKLRAEN MAIREATQSP ACKNCGGPAM LGNVSMERQQ  120
LRLENARLKE ELDRLCALAG KFLGKSASSL VGHISPTMPS SVLELGVGNN VFAGFNSVVA  180
PTISAVPDYL PVFSSNPLGA VAPTMGKNME ALLGSGRSML LELALAAMEE LMSMAQMEEP  240
LWFPCSQDGP KALNYEQYRR TFRPIPGISP VGSVPEASRE TRIVSITSVA LVETLMDSAE  300
LHVLSPLVAV REVSFLRFCK QHAEGVWAVV DVAVDGIRAD LSSASCRRLP SGCLVQDMPD  360
GYSKVTWVEH AEYDEGQVHH LYRPLLRSGQ AFGAGRWVAT LQRQCECLAT LVSPTAVARD  420
ETGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.21e-112HD-ZIP family protein