PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV81739.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 148aa    MW: 16859.5 Da    PI: 11.9814
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV81739.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.91.7e-2072115851
                 HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   8 nrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 +  v fskRr g++ KA+EL vLCdaev +++fs+ gklye+ss
  RWV81739.1  72 RGRVRFSKRRSGLFNKAFELAVLCDAEVVLLVFSPGGKLYEFSS 115
                 55799*************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MERVVGIAVS SNEYRWLQSR DRRNHQRPPQ PLILSEGDAS HSPDLVTLGL VWGIRVSGSA  60
PRRRRCRMAP RRGRVRFSKR RSGLFNKAFE LAVLCDAEVV LLVFSPGGKL YEFSSVSRYA  120
ALPLPPFPST ASTITRGREE NKRRWLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.12e-12MIKC_MADS family protein