PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV81798.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 487aa MW: 55176.6 Da PI: 4.9065

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV81798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.3	6.5e-35	14	104	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+ye+++d+++++++sws ++ sfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +g+k+ll++i+ RWV81798.1 14 FLIKTYEMVDDPATDSTVSWSPTNVSFVVWNQLEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIDPDQ---------WEFANEDFIRGEKHLLKNIH 101 9******************999*************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k RWV81798.1 102 RRK 104 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MESPRGNSSS PPPFLIKTYE MVDDPATDST VSWSPTNVSF VVWNQLEFAR DLLPKYFKHN 60 NFSSFVRQLN TYGFRKIDPD QWEFANEDFI RGEKHLLKNI HRRKPVYSHS PHNQGSSSGP 120 LSEAQKQDLE EEIERLKQEK AMLVNELQKH VHKQHGMDHQ MQSLEERLQV LENRHRSLMA 180 FLTQIVQEPR FLSNLVHDSG LLSKKRRLPK IDYFNEDTAV EDNQIVTFQQ PLVGEKSDYA 240 SIHMLDMEPF EKIESSLNSL ENFFRGVSQA FGDDMCYDSI VACLPTDVLL TEMNASSVET 300 GASLHSLLPN LYPSSPCLGD IHSSPETAEC MSHVDTRASP QSLLHNLYPS SRCLGDIHSS 360 PETAECMSHV ETPAIPATEN QIDSRIKVAE IDVNLEPAAT EVVSSRDQTT STTASTMPTG 420 VNDVFWQQFL TEIPGSSDTT IVQLKRRDSD DEHSEGKIRE VENMCWNRGN VDHLVEKMGN 480 LISVEKT

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MESPRGNSSS PPPFLIKTYE MVDDPATDST VSWSPTNVSF VVWNQLEFAR DLLPKYFKHN  60
NFSSFVRQLN TYGFRKIDPD QWEFANEDFI RGEKHLLKNI HRRKPVYSHS PHNQGSSSGP  120
LSEAQKQDLE EEIERLKQEK AMLVNELQKH VHKQHGMDHQ MQSLEERLQV LENRHRSLMA  180
FLTQIVQEPR FLSNLVHDSG LLSKKRRLPK IDYFNEDTAV EDNQIVTFQQ PLVGEKSDYA  240
SIHMLDMEPF EKIESSLNSL ENFFRGVSQA FGDDMCYDSI VACLPTDVLL TEMNASSVET  300
GASLHSLLPN LYPSSPCLGD IHSSPETAEC MSHVDTRASP QSLLHNLYPS SRCLGDIHSS  360
PETAECMSHV ETPAIPATEN QIDSRIKVAE IDVNLEPAAT EVVSSRDQTT STTASTMPTG  420
VNDVFWQQFL TEIPGSSDTT IVQLKRRDSD DEHSEGKIRE VENMCWNRGN VDHLVEKMGN  480
LISVEKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	6e-81	HSF family protein