PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV82449.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 493aa MW: 53340.4 Da PI: 9.5611

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV82449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.5	1.2e-05	207	228	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C++Cg++F+ +++L+ H+ H RWV82449.1 207 CSKCGEVFTKPDSLELHQAIrH 228 ******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MVEKRPLVLI HLLAALLLMA LTSFLPAATP TSHPHHHSDD RHERKKKTKK PPPTPRTRTL 60 SPSSSSSSSW EQFKSLLSCR STAVAQVHDP SSTAARLRRA SCGSSICAIR DVVHGNTRVV 120 HRSDTDLSSE ASSIAQHETA PLARAARSAR HHPPVSSLGC GIHSRGGIQL PKLSGCYECH 180 AIGALLLIHN SDERRRYPRP RTTLSACSKC GEVFTKPDSL ELHQAIRHAG TNMHPTRSNF 240 FFHFFALSFF LNTCFSHDNV RSVSELGPED SGRNIVEIIF KSSWQKKDRP ICKIERILKV 300 HSAPRTVARF EDYRAAVKSR ALPHLSSSSS SSGSAVAARH HPSRCAADGN ELLRFHCTSL 360 SCPLGARGSN SLCPNSSSSS PSSSCGVCTI IRHGFARTQY PYGVRTTASS CGAHDSGPSA 420 AAEDGRGERR AMLVCRVIAG RVRPTPDDPA AEETYDAVAV GDGCGAYGNL EELIVANPRA 480 ILPCFVVIYR AVG

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MVEKRPLVLI HLLAALLLMA LTSFLPAATP TSHPHHHSDD RHERKKKTKK PPPTPRTRTL  60
SPSSSSSSSW EQFKSLLSCR STAVAQVHDP SSTAARLRRA SCGSSICAIR DVVHGNTRVV  120
HRSDTDLSSE ASSIAQHETA PLARAARSAR HHPPVSSLGC GIHSRGGIQL PKLSGCYECH  180
AIGALLLIHN SDERRRYPRP RTTLSACSKC GEVFTKPDSL ELHQAIRHAG TNMHPTRSNF  240
FFHFFALSFF LNTCFSHDNV RSVSELGPED SGRNIVEIIF KSSWQKKDRP ICKIERILKV  300
HSAPRTVARF EDYRAAVKSR ALPHLSSSSS SSGSAVAARH HPSRCAADGN ELLRFHCTSL  360
SCPLGARGSN SLCPNSSSSS PSSSCGVCTI IRHGFARTQY PYGVRTTASS CGAHDSGPSA  420
AAEDGRGERR AMLVCRVIAG RVRPTPDDPA AEETYDAVAV GDGCGAYGNL EELIVANPRA  480
ILPCFVVIYR AVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	43	51	ERKKKTKKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	2e-91	C2H2 family protein