PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV82547.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 223aa    MW: 24321.4 Da    PI: 9.3774
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV82547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.11.7e-09108129426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 +lC++f++ G C yG++C+F H+
  RWV82547.1 108 RLCNYFLA-GNCTYGEKCRFLHS 129
                 79******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MEATGRNGNK RMHQRLGPSQ AVAPDRANNK VCYHWRAGRC NRHPCPFLHS EMPTPQQQSA  60
APDGGVAKRN LVWKNPSNAG AASAPPSKWG KGRGGGAVGR PPGKAPDRLC NYFLAGNCTY  120
GEKCRFLHSW FVGDSFSLLT SLQGHQKAVS GIALPSGSDK LYSGSKDESV RVWDCQSGQV  180
QMLSIINVFC FCLFFLAVQV WVATESGNLE ATYTHNEEHV STR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.12e-50C3H family protein