PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV82629.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

G2-like

Protein Properties

Length: 314aa MW: 36239 Da PI: 11.2083

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV82629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	36.1	1.5e-11	213	237	2	26
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 pr+rWt++LH+rFv+ave LGG+e RWV82629.1 213 PRMRWTTTLHARFVHAVELLGGHES 237 8*********************986 PP
2	Myb_DNA-binding	37.3	6.4e-12	214	296	1	45
TSSS-HHHHHHHHHHHHHTTTT.....................................-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....................................tWktIartmg.kgRtlkqcksrwq 45 r+rWTt ++ ++v+av++lGg+ t+k++ + m +tl ++ks++q RWV82629.1 214 RMRWTTTLHARFVHAVELLGGHestmhfpaariiymdqkeilrsfydfssfaffrrsgaTPKSVLELMDvRDLTLAHVKSHLQ 296 89********************************************************************************9 PP
3	G2-like	37.3	5.9e-12	272	296	27	51
G2-like 27 AtPktilelmkvkgLtlehvkSHLQ 51 AtPk++lelm+v +Ltl+hvkSHLQ RWV82629.1 272 ATPKSVLELMDVRDLTLAHVKSHLQ 296 9************************ PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
LSLSQSINHR KKKKRRRRWW WWRRRRRRKE EYRDQMELFS AAAAEAAAAA DLSLQISSLE 60 TTASSWRKPG DENMELGFRC RDLDSTTTTN KNRTAASAAR ATASELSLAN PSAGVSAATS 120 NDTFHHSQPR HLQYHHHHPL HHQEQSWLEP ITGIPIYQHP PFFPAVTPHQ QHHLCGSPSS 180 SNHALTHFVA GQGLSRSRYL PPRFPAKRSM RSPRMRWTTT LHARFVHAVE LLGGHESTMH 240 FPAARIIYMD QKEILRSFYD FSSFAFFRRS GATPKSVLEL MDVRDLTLAH VKSHLQVRQI 300 LYHLSRSWFL PSCN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	10	15	RKKKKR
2	10	16	RKKKKRR
3	10	18	RKKKKRRRR
4	10	28	RKKKKRRRRWWWWRRRRRR
5	10	29	RKKKKRRRRWWWWRRRRRRK
6	11	16	KKKKRR
7	11	17	KKKKRRR
8	11	17	RKKKKRR
9	11	29	RKKKKRRRRWWWWRRRRRR
10	11	30	RKKKKRRRRWWWWRRRRRRK
11	12	18	KKKKRRR
12	12	17	KKKRRR
13	12	18	RKKKKRR
14	12	30	RKKKKRRRRWWWWRRRRRR
15	12	31	RKKKKRRRRWWWWRRRRRRK
16	13	18	KKKRRR
17	13	32	RKKKKRRRRWWWWRRRRRRK
18	14	33	RKKKKRRRRWWWWRRRRRRK
19	15	34	RKKKKRRRRWWWWRRRRRRK
20	23	29	RKKKKRR
21	23	28	RRRRRR
22	23	30	RRRRRRKE
23	24	30	RRRRRKE
24	25	31	RRRRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-29	G2-like family protein