PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV82655.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 419aa MW: 46588.8 Da PI: 8.6958

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV82655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19	3.8e-06	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk F r nL+ H r H RWV82655.1 6 FVCEICGKGFQRDQNLQLHRRGH 28 89*******************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MATNRFVCEI CGKGFQRDQN LQLHRRGHNL PWKLRQRTSK ETRKRVYVCP EKTCVHHHPS 60 RALGDLTGIK KHFCRKHGEK KWKCDRCSRC YAVQSDWKAH SKTCGTREYR CDCGTIFSRW 120 CMYSANSSPH LTIVAWFCCC CSFHIVVYSL MSRRDSFITH RAFCDALAEE TARVAASNMS 180 SSVTSVRNGS LNFADGLMRS NVVQNFPSFL KPPVAESEMV DAARAGLSLW MSQAPPLETL 240 TKADDLVLGD VDGDPFASQL SWIYRNKLVP SGSGELISSI TLPTSGMEET EAPHSLLLSA 300 PYHYSTQHHH HLVPPAPDTS ATAFLQRAAQ IGVTASRPTS EAKSPDGNIR YLNTNRSYSA 360 ANPGNAMENA ADPLRMMYST RHHVAQKDEG AGGETKDFLG VDAPTICASS LSGWIRIRN

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MATNRFVCEI CGKGFQRDQN LQLHRRGHNL PWKLRQRTSK ETRKRVYVCP EKTCVHHHPS  60
RALGDLTGIK KHFCRKHGEK KWKCDRCSRC YAVQSDWKAH SKTCGTREYR CDCGTIFSRW  120
CMYSANSSPH LTIVAWFCCC CSFHIVVYSL MSRRDSFITH RAFCDALAEE TARVAASNMS  180
SSVTSVRNGS LNFADGLMRS NVVQNFPSFL KPPVAESEMV DAARAGLSLW MSQAPPLETL  240
TKADDLVLGD VDGDPFASQL SWIYRNKLVP SGSGELISSI TLPTSGMEET EAPHSLLLSA  300
PYHYSTQHHH HLVPPAPDTS ATAFLQRAAQ IGVTASRPTS EAKSPDGNIR YLNTNRSYSA  360
ANPGNAMENA ADPLRMMYST RHHVAQKDEG AGGETKDFLG VDAPTICASS LSGWIRIRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.2	3e-99	C2H2 family protein