PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV82727.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 441aa MW: 48838.2 Da PI: 9.2563

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV82727.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5.1e-06	60	82	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H RWV82727.1 60 YVCEICNQGFQRDQNLQMHRRRH 82 9*********************9 PP
2	zf-C2H2	14.7	8.9e-05	138	160	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+k + +s++k H++t+ RWV82727.1 138 WVCARCSKAYAVQSDYKAHLKTC 160 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MLGRPSPAPS PPLGGTTVSS TFPQHSATNS KKKRRPAGTP DPDAEVVALS PRTLLESDRY 60 VCEICNQGFQ RDQNLQMHRR RHKVPWKLLK REAADQVRKR VFVCPEPTCL HHDPAHALGD 120 LVGIKKHFRR KHSNHRQWVC ARCSKAYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRCPQSS 180 YRLLFVSCSS LNAQRKMITT QPPACLSRTT STTSRSSDTN FSPRVWAGLS MQNPAAAVFL 240 SRPDQPPSSR PDQCCTQSIE LQLLSPSSNG HTPLSSSASL STAIEEAKVT KLQLSIGPAA 300 DPAVSEDWKS AADRLKDETE QQLKLAVAEK ALAEEARLQA RRQLELAGHE YEKAKGMRQQ 360 AQLELDRVHA VREQAVRQIN STLLQITCYA CKQQFQAKPA MASESNSLVV SYVSVVTEGE 420 EDNDDHGDQL KISRSQLPSN I

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MLGRPSPAPS PPLGGTTVSS TFPQHSATNS KKKRRPAGTP DPDAEVVALS PRTLLESDRY  60
VCEICNQGFQ RDQNLQMHRR RHKVPWKLLK REAADQVRKR VFVCPEPTCL HHDPAHALGD  120
LVGIKKHFRR KHSNHRQWVC ARCSKAYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRCPQSS  180
YRLLFVSCSS LNAQRKMITT QPPACLSRTT STTSRSSDTN FSPRVWAGLS MQNPAAAVFL  240
SRPDQPPSSR PDQCCTQSIE LQLLSPSSNG HTPLSSSASL STAIEEAKVT KLQLSIGPAA  300
DPAVSEDWKS AADRLKDETE QQLKLAVAEK ALAEEARLQA RRQLELAGHE YEKAKGMRQQ  360
AQLELDRVHA VREQAVRQIN STLLQITCYA CKQQFQAKPA MASESNSLVV SYVSVVTEGE  420
EDNDDHGDQL KISRSQLPSN I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	31	35	KKKRR
2	31	36	KKKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-111	C2H2 family protein