PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV82860.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

WOX

Protein Properties

Length: 233aa MW: 26279.8 Da PI: 7.0602

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV82860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	44.1	3.5e-14	2	52	13	57
HHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 13 eeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++L +l+++ r p+ae++++++++l +++ ++V++WFqN++a+e++ RWV82860.1 2 RILRDLYYNngLRSPNAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 52 789999987568*************************************97 PP
2	Wus_type_Homeobox	89.7	2.8e-29	1	54	13	65
Wus_type_Homeobox 13 ikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 i+iL++ly+ +Glr+Pn+e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ RWV82860.1 1 IRILRDLYYnNGLRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 54 79***8779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
IRILRDLYYN NGLRSPNAEQ IQRISARLRQ YGKIEGKNVF YWFQNHKARE RQKKRLTVDI 60 TPTTSSSKSS AVVSPGIPTT SRSSGSYAVG LSGNDAYDAA ASAETSFRQE YCMSGSMSSL 120 GTTPWRHHCL SDRVANTMSR DIETLQLFPI NTVKEEHEGE HHYHAPPHSN AKDCGDDDDD 180 SKNQYVPSFY HYSQGRLAEE QHQLYNLNSS NAATCDSLEL TLNSYRYAPP DSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-28	WOX family protein