PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV82996.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB
Protein Properties Length: 328aa    MW: 36268.9 Da    PI: 7.2369
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV82996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.5e-1754101148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g W++eEde+l++ ++++G g+W+++++  g+ R++k+c++rw +yl
       RWV82996.1  54 KGLWSPEEDEKLLNHITRFGHGCWSSVPKLAGLQRCGKSCRLRWINYL 101
                      678*******************************************97 PP
2Myb_DNA-binding50.93.6e-16107150146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg ++++E++l+vd+++ lG++ W+ Ia++++ gRt++++k++w++
       RWV82996.1 107 RGTFSQQEEDLIVDLHAVLGNR-WSQIASRLP-GRTDNEIKNFWNS 150
                      899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MQISSAHGSI CLTVNSPPFK NTPRCLIPLP TCFALRLQVD MGRHSSCYKP KLRKGLWSPE  60
EDEKLLNHIT RFGHGCWSSV PKLAGLQRCG KSCRLRWINY LRPDLKRGTF SQQEEDLIVD  120
LHAVLGNRWS QIASRLPGRT DNEIKNFWNS SLKKKLQQIG VDPNTHKPLD QADKAAGSSE  180
SKPFVSDGSH ASSFRHSPYG SNCGGDEKAS DGPLWFEQNC RLLNVIPELS SLQLKPMLHL  240
PPDTLLTPSQ FLEAGNPSNS SASSVNGSIG VELQGSIFPW PELSPQDLEE EPGDLKWSEY  300
LNGAAITSAE IRCSYGVGKG GEELDPWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09540.16e-82MYB family protein