PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83283.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 347aa MW: 37494.3 Da PI: 6.067

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0014	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C ++F++ L H+r+H RWV83283.1 4 HTCNLCFRRFPNGRALGGHMRSH 26 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MDRHTCNLCF RRFPNGRALG GHMRSHVMSA AAPAQHPGNS STSISSERPA AEQEVVEEAE 60 EEVGGSYGLR MNPRKSFRLV DPQFSSSVAA VELAGSSDVV QDRESETESP KENRRRSKRS 120 RRDTASPPEQ PEAEPASSVS DATPEEDVAL SLMMLSRDSW ATAAAEEEGR LSDGFDEQEE 180 EEDRRAAART RQPPRKGRSR YQCGACKKVF RSYQALGGHR ASHKKTNGCV PAAEPRIYGE 240 ADSADANADA KVHECPFCFR VFSSGQALGG HKRSHFTSSA TTVIENSPVS RPPPSCSPQI 300 TSPVASVATK CGGSIGLIDL NFPAPSMDDV ELSAVSDMDF VANPRPN

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MDRHTCNLCF RRFPNGRALG GHMRSHVMSA AAPAQHPGNS STSISSERPA AEQEVVEEAE  60
EEVGGSYGLR MNPRKSFRLV DPQFSSSVAA VELAGSSDVV QDRESETESP KENRRRSKRS  120
RRDTASPPEQ PEAEPASSVS DATPEEDVAL SLMMLSRDSW ATAAAEEEGR LSDGFDEQEE  180
EEDRRAAART RQPPRKGRSR YQCGACKKVF RSYQALGGHR ASHKKTNGCV PAAEPRIYGE  240
ADSADANADA KVHECPFCFR VFSSGQALGG HKRSHFTSSA TTVIENSPVS RPPPSCSPQI  300
TSPVASVATK CGGSIGLIDL NFPAPSMDDV ELSAVSDMDF VANPRPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	2e-42	C2H2 family protein