PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83395.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 205aa MW: 22413.8 Da PI: 7.2166

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83395.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	143.5	6.2e-45	11	110	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll++l +++reda++sl+yeAear++dPvyG+vg i+ lq+q+++l++el+++++ RWV83395.1 11 PCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKVFGASNVTKLLNELLPHQREDAVNSLAYEAEARVKDPVYGCVGAISVLQRQVQRLQKELEAANA 109 7**********************************************************************************************9987 PP DUF260 100 e 100 e RWV83395.1 110 E 110 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MASSSSSSNS PCAACKFLRR KCMPGCIFAP YFPPEEPQKF ANVHKVFGAS NVTKLLNELL 60 PHQREDAVNS LAYEAEARVK DPVYGCVGAI SVLQRQVQRL QKELEAANAE LLRYACNEIP 120 MGLPVPPTMA SPMMDYPRIE YCRRTGINGG SPLCPAPALA LPSLLPPWSA NDFPGYHESG 180 NPVEMQMAAC ELQNDQKATN LSSLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	1e-69	LBD family protein