PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV83414.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C2H2
Protein Properties Length: 289aa    MW: 32165.3 Da    PI: 9.0965
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV83414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00032211233123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 + C  Cgk F  + + ++H +++
  RWV83414.1 211 FACRRCGKAFAVRGDWRTHEKNC 233
                 78*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MSFNANDQEE DNTVLLLSLW PPGSQSSPAS SPCSSSTSTF VASNWLRASS KPQYHFTHSS  60
NQVDDDSSVT IELSIAPPNA RPRASTSTVA TTAAGLNLVP SRYWIPSPAE ILVGATQFSC  120
TVCKKTFNRF KKMQVDERHM HMWGHGSQFR RGSESLRGIT RQLPSPSLLK LPCYCCADGC  180
KNNIEHPRSR PLKGFRTLQT HYKRKHGVRP FACRRCGKAF AVRGDWRTHE KNCGKLWFCI  240
CGSDFKHKRS LKDHVRSFGS GHAPHVAEPM SIDEEVGELE VKDSDELGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13290.11e-93C2H2 family protein