PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83465.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 287aa MW: 30174.9 Da PI: 7.8012

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0017	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H RWV83465.1 126 YECKTCNKCFPSFQALGGHRTSH 148 99*********999998888777 PP
2	zf-C2H2	13.7	0.00018	196	218	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H RWV83465.1 196 HECSICGSEFSSGQALGGHMRRH 218 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
METPEEARGS NSSDSISNGE LVQALVKGKR TKRPRSQPPP PVAVAADASS ASSAEAAPGI 60 VTEEEEDMAN CLILLAQGRA LDAGPPPDQA RKDDAAGRGG GAEKFTSRRF AEAATTTNGK 120 AGFYVYECKT CNKCFPSFQA LGGHRTSHKK PKLAPPPTTA AQEKVVVDDD MLQISMNSFS 180 KPIGGSGQSN TKPKIHECSI CGSEFSSGQA LGGHMRRHRP LAAADAQEAK KDKSFLPLDL 240 NLPAPADEEL HRPPSPSFTL ASKRPLIFPA PVSASASASA LVVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	3e-39	C2H2 family protein