PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV83689.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family SBP
Protein Properties Length: 174aa    MW: 19615.2 Da    PI: 10.1194
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV83689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP116.51.4e-3666151178
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS...EEETT.....T--SS--S-STTTT-------S--- CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr...fhels.....efDeekrsCrrrLakhnerrrkkqa 78 
                 +Cq+e+C+adl+e+k+y+rrhkvCe+hska+vv+vsgl+qrfCqqCsr   fh l       fD++krsCrrrLa+hnerrrk+++
  RWV83689.1  66 CCQAEKCTADLAEVKRYYRRHKVCEAHSKAAVVIVSGLRQRFCQQCSRlplFHPLPllpymLFDDSKRSCRRRLAGHNERRRKNTT 151
                 6**********************************************988899985333336*********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MEHRRPSADP QKKSGREKAK KEVQGDGDEE GEEVVPGGRI GEDKKRRPCS SAASKRGSGG  60
GASPPCCQAE KCTADLAEVK RYYRRHKVCE AHSKAAVVIV SGLRQRFCQQ CSRLPLFHPL  120
PLLPYMLFDD SKRSCRRRLA GHNERRRKNT TSETQGERLK ALQASRPRWE DSDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.15e-32SBP family protein