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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV83751.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | bHLH | ||||||||
| Protein Properties | Length: 92aa MW: 10116.5 Da PI: 9.79 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 25.2 | 2.9e-08 | 20 | 60 | 15 | 55 |
HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+i + +++L+ llP+ + + ++s ae+L+ A+++I+sLq
RWV83751.1 20 QIADLLAKLQALLPEhR-IRSTDRVSAAEVLQDACNHIRSLQ 60
7999***********55.455566*****************9 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 92 aa Download sequence |
MASRRSRSTQ ATSSRITDEQ IADLLAKLQA LLPEHRIRST DRVSAAEVLQ DACNHIRSLQ 60 REVDGLSGRL AQLLAMTDSS NAQTAVIRSL LM |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G26945.1 | 8e-28 | bHLH family protein | ||||




