PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83787.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 463aa MW: 51228.8 Da PI: 10.0698

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.3	3.7e-18	107	152	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd l ++v+++G+++W++I+r ++ gR++k+c++rw + RWV83787.1 107 KGPWSPEEDASLQRLVQRHGPRNWSLISRSIP-GRSGKSCRLRWCNQ 152 79****************************.*********985 PP
2	Myb_DNA-binding	55.5	1.3e-17	161	203	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde++++a++++G++ W+tIar + gRt++ +k++w++ RWV83787.1 161 PFTAEEDEIIIRAHRRFGNK-WATIARLLS-GRTDNAIKNHWNST 203 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
WLVKLHSGVC SPKHPLRSRR KINRWATREP ATSVNGRKGR GIVMEGGRPR CFLLPAHNPP 60 ARRPLSCMDG PIRYIHRSIE ISSRWEFRDS MAATTGRSRC KEATRIKGPW SPEEDASLQR 120 LVQRHGPRNW SLISRSIPGR SGKSCRLRWC NQLSPQVEHR PFTAEEDEII IRAHRRFGNK 180 WATIARLLSG RTDNAIKNHW NSTLKRKHTP PCASSGDGGL QHHSYDAIMA AAAIEQDDEP 240 EEARPLKRAS SDGPVLLSGG AGLWLSPGSP SDSDVSDSSH HSHPVISSAA EVPHIYRPVP 300 RPGGVVIHSS PCRGPHQTEP MTAATTAATP IHNDDDPVTS LTLSLPGSDP MDTSSSDHHH 360 HHHHHQGSPV SDIQNQLQLL PTPQPMTQRR SAVASPSAAE EERRPTPIPF SAEFLAVMQE 420 MIRKEVRCYM AGLEQSRRLC GMQPPPEGVR SAAMNRIGVT KIE

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

WLVKLHSGVC SPKHPLRSRR KINRWATREP ATSVNGRKGR GIVMEGGRPR CFLLPAHNPP  60
ARRPLSCMDG PIRYIHRSIE ISSRWEFRDS MAATTGRSRC KEATRIKGPW SPEEDASLQR  120
LVQRHGPRNW SLISRSIPGR SGKSCRLRWC NQLSPQVEHR PFTAEEDEII IRAHRRFGNK  180
WATIARLLSG RTDNAIKNHW NSTLKRKHTP PCASSGDGGL QHHSYDAIMA AAAIEQDDEP  240
EEARPLKRAS SDGPVLLSGG AGLWLSPGSP SDSDVSDSSH HSHPVISSAA EVPHIYRPVP  300
RPGGVVIHSS PCRGPHQTEP MTAATTAATP IHNDDDPVTS LTLSLPGSDP MDTSSSDHHH  360
HHHHHQGSPV SDIQNQLQLL PTPQPMTQRR SAVASPSAAE EERRPTPIPF SAEFLAVMQE  420
MIRKEVRCYM AGLEQSRRLC GMQPPPEGVR SAAMNRIGVT KIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-70	MYB family protein