PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83886.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 676aa MW: 73892.7 Da PI: 9.5349

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	95.6	4.6e-30	75	159	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+ qe+laL+++r+em+ ++r++ lk+plWeevs+k++e g++r++k+Ckek+en++k+yk++keg+ +r++++ +++f+qlea RWV83886.1 75 RWPLQETLALLKIRSEMDAAFRDATLKAPLWEEVSRKLAELGYKRTAKKCKEKFENVHKYYKRTKEGRAGRQDGK--GYRFFSQLEA 159 8*******************************************************************85555..5****985 PP
2	trihelix	109.4	2.2e-34	452	537	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+e+e++++++ k+plWee+s+ m++ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a RWV83886.1 452 RWPKAEVHALIKLRSELESKYQETGPKGPLWEEISAGMQRLGYKRSAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 537 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MQLQRGGAQY GVTLPGIPGP EAEAASPISS RPPAGAPRAN FEELGPALAG NSPDDEVLAT 60 GEEAERGGGG VTGNRWPLQE TLALLKIRSE MDAAFRDATL KAPLWEEVSR KLAELGYKRT 120 AKKCKEKFEN VHKYYKRTKE GRAGRQDGKG YRFFSQLEAL HSGSSAAVTP AASVPSTLVA 180 TSSAFSAGLV GPPPSRAQPL SALAPPTLAM PTRVVVLELT PPGGAQGISS SGAVADSATA 240 AGISFSSNSS SSEWSESDDE ETAGERQEGR KRKSNGGDSG PSRKMKAFFH RLMKQVMQRQ 300 EAMQQSLLDA MEKREQDRMI RDEDWRRQEM TRLNHDQELL AQERAMASSR DTAIISYLQK 360 ITGRTIPMPA MSAIPLSISP FPLQQSHTPP PQPAAPQLPP PQQQQRPPSP VQSPSQQHVV 420 QHHHHRTEMA RYQPSSAMDL VPSSVPMSSS SRWPKAEVHA LIKLRSELES KYQETGPKGP 480 LWEEISAGMQ RLGYKRSAKR CKEKWENINK YFKKVKESNK KRPEDSKTCP YFHQLDALYR 540 SKLLGTGSTM GSPASDQRKS DTPRNMSQKQ APPPPPPPLQ PAAEPETKNA TRTQTTNGSL 600 HLTFSDQGLE NVSTVINDYD KLDQADSDYM NQEDDDDDGK LHYKIQFQRQ SMSAGGGGNP 660 STAASATASS FFAISR

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MQLQRGGAQY GVTLPGIPGP EAEAASPISS RPPAGAPRAN FEELGPALAG NSPDDEVLAT  60
GEEAERGGGG VTGNRWPLQE TLALLKIRSE MDAAFRDATL KAPLWEEVSR KLAELGYKRT  120
AKKCKEKFEN VHKYYKRTKE GRAGRQDGKG YRFFSQLEAL HSGSSAAVTP AASVPSTLVA  180
TSSAFSAGLV GPPPSRAQPL SALAPPTLAM PTRVVVLELT PPGGAQGISS SGAVADSATA  240
AGISFSSNSS SSEWSESDDE ETAGERQEGR KRKSNGGDSG PSRKMKAFFH RLMKQVMQRQ  300
EAMQQSLLDA MEKREQDRMI RDEDWRRQEM TRLNHDQELL AQERAMASSR DTAIISYLQK  360
ITGRTIPMPA MSAIPLSISP FPLQQSHTPP PQPAAPQLPP PQQQQRPPSP VQSPSQQHVV  420
QHHHHRTEMA RYQPSSAMDL VPSSVPMSSS SRWPKAEVHA LIKLRSELES KYQETGPKGP  480
LWEEISAGMQ RLGYKRSAKR CKEKWENINK YFKKVKESNK KRPEDSKTCP YFHQLDALYR  540
SKLLGTGSTM GSPASDQRKS DTPRNMSQKQ APPPPPPPLQ PAAEPETKNA TRTQTTNGSL  600
HLTFSDQGLE NVSTVINDYD KLDQADSDYM NQEDDDDDGK LHYKIQFQRQ SMSAGGGGNP  660
STAASATASS FFAISR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	126	KRTAKKCKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	1e-59	Trihelix family protein