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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV83967.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | ERF | ||||||||
| Protein Properties | Length: 173aa MW: 18862.4 Da PI: 8.8935 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 61.1 | 2.5e-19 | 82 | 131 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+++AeIrdp ng +r++lg+f taeeAa a+++a+ +++g
RWV83967.1 82 YRGVRQRP-WGKFAAEIRDPGRNG--ARVWLGTFSTAEEAALAYDRAAFRIRG 131
9*******.**********95554..*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 173 aa Download sequence |
MGTHPQQQCP GLAVLQRIRS HLLDEELFTA AGATMIDVHY PTLEATGDGS EELCHVAAED 60 SPPLPMPPPR APFPAQERGR NYRGVRQRPW GKFAAEIRDP GRNGARVWLG TFSTAEEAAL 120 AYDRAAFRIR GSRALLNFPL LIGSQETPPP SSTLPPLSGN KRRKRVAALA SDC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G17500.1 | 9e-28 | ERF family protein | ||||




