PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV83970.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 367aa MW: 40547.8 Da PI: 8.6818

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV83970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.4	3.6e-40	119	277	3	134
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesssssasnss 86 ++k rhski T+ g+RdRR+Rls ++a+ fF Lqd LGfdk+skt+eWLl+++k+ai el + s ssa c++++ +ss++n+ RWV83970.1 119 VRKCRHSKIVTASGPRDRRMRLSTDVARSFFRLQDTLGFDKASKTVEWLLTMSKAAIEELGTLspadelsacsnrspkSESSALVCQDSATVSSSKNKP 217 6899******************************************************999888888888866554222222333333333333222 PP TCP 87 sg...........kaaksaa.kskksqksaasalnlakesrakarararertrekmrikn 134 s+ k++k+ + k+++k + ++++akesrakarararertrek+r + RWV83970.1 218 SStvtaaaasqvkKKSKAREgAVKPTRKAEYYHSAPAKESRAKARARARERTREKQRRMT 277 2256677777776666666668888888888999*******************98655 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
NLLEVKTFRV QFLSSIKQSL LIILPRETEK MLPIRDPEYT FAQSFNEQLE FNPHLLPNGS 60 YFPSTPTVFC PDGFHDLFLP SNVIGIATAT PTSTRPTLPL GDSATSVERQ EGDGRKRGVR 120 KCRHSKIVTA SGPRDRRMRL STDVARSFFR LQDTLGFDKA SKTVEWLLTM SKAAIEELGT 180 LSPADELSAC SNRSPKSESS ALVCQDSATV SSSKNKPSST VTAAAASQVK KKSKAREGAV 240 KPTRKAEYYH SAPAKESRAK ARARARERTR EKQRRMTSSD IIKEETSLNN LNSLMEFANI 300 EEDESWAPNW CLNVATDTAY QVPMIGGGSV LIPILENGAI LEEQWDVDAL SLYSTTSLVA 360 GDSYPYV

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

NLLEVKTFRV QFLSSIKQSL LIILPRETEK MLPIRDPEYT FAQSFNEQLE FNPHLLPNGS  60
YFPSTPTVFC PDGFHDLFLP SNVIGIATAT PTSTRPTLPL GDSATSVERQ EGDGRKRGVR  120
KCRHSKIVTA SGPRDRRMRL STDVARSFFR LQDTLGFDKA SKTVEWLLTM SKAAIEELGT  180
LSPADELSAC SNRSPKSESS ALVCQDSATV SSSKNKPSST VTAAAASQVK KKSKAREGAV  240
KPTRKAEYYH SAPAKESRAK ARARARERTR EKQRRMTSSD IIKEETSLNN LNSLMEFANI  300
EEDESWAPNW CLNVATDTAY QVPMIGGGSV LIPILENGAI LEEQWDVDAL SLYSTTSLVA  360
GDSYPYV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	1e-22	TCP family protein