PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV84077.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB_related

Protein Properties

Length: 240aa MW: 26882.1 Da PI: 6.1735

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV84077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5e-17	14	84	1	48
TSSS-HHHHHHHHHHHHHTTTT........................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg........................tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++lvd+++q+G g +W++Ia ++ gRt++++k+ w+++l RWV84077.1 14 KGAWSAEEDKILVDYIQQHGHGnwrvmpkkagfdrvsyavfcfavrRWSAIAGSLP-GRTDNEIKNVWHTHL 84 79****************************************************.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MGRAPCCDKV GLKKGAWSAE EDKILVDYIQ QHGHGNWRVM PKKAGFDRVS YAVFCFAVRR 60 WSAIAGSLPG RTDNEIKNVW HTHLKKRMDP KEATRAPKRE KKKKRKRDAK NKLEAEQANQ 120 QPDADAAHRS QRCDDAGFVE VSLEQSYSGF SSAATDSSVM SGDATVDAKD ESFTSKEFKE 180 IDESFWLDAL AVDGPLQLPP AAVADSEAFS DDMEFWLKVF MEADHLEDSS QMNPANVHLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	107	KKRMDPKEATRAPKREKKKKRKR
2	97	106	PKREKKKKRK
3	98	106	KREKKKKRK
4	101	106	KKKKRK
5	101	107	KKKKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	7e-40	MYB family protein