PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV84306.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family YABBY
Protein Properties Length: 148aa    MW: 16845.5 Da    PI: 9.5482
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV84306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY113.14.9e-351313524159
       YABBY  24 vsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPekr 122
                 v++P   l+  v vrC +C+sll v+  ++ q l+ ++         +l++++v ++ l++    ++   + ++++++ +  ++++ +    i+P ekr
  RWV84306.1  13 VNIPCDNLLDSVRVRCECCSSLLCVSSGVQFQKLPPQDI--------QLQNHNVGSQGLHMDCGFSSMCANMKTMNSMRSV-QQQMLQ----IHPAEKR 98 
                 89************************9999999999995........5556666666666655555555555555554433.344443....99***** PP

       YABBY 123 qrvPsaynrfikeeiqrikasnPdishreafsaaakn 159
                 qrvPsaynrfikeei+r+ka+nPdi hreafs+aakn
  RWV84306.1  99 QRVPSAYNRFIKEEIRRLKATNPDIRHREAFSTAAKN 135
                 ************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MRNLLEKKEN KGVNIPCDNL LDSVRVRCEC CSSLLCVSSG VQFQKLPPQD IQLQNHNVGS  60
QGLHMDCGFS SMCANMKTMN SMRSVQQQML QIHPAEKRQR VPSAYNRFIK EEIRRLKATN  120
PDIRHREAFS TAAKNVRSSL SCKVTELH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.15e-26YABBY family protein