PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV84320.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 307aa MW: 34918.8 Da PI: 5.8306

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV84320.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	146.7	1.2e-45	6	160	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk............................kvkaeekewyfFskrdkkyatgkr 73 pGfrFhPt+eel+ +yLk+ ++gkkl+l evi++++iy+++Pw+Lp ++ +e+ewyf+++rd+k+a+g r RWV84320.1 6 PGFRFHPTEEELLEFYLKRMIRGKKLQL-EVITTINIYRHDPWELPGtvlsvrlyslslslslmsieinggnctgLARIGEREWYFYVPRDRKQASGGR 103 9*************************.99***********5589********99999888877764445999************* PP NAM 74 knratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++r+tk+g+Wkatg+d++v s+ ++l+glkktLv+y+grap+g+ktdWvm+eyrl RWV84320.1 104 PSRTTKRGFWKATGSDRPVRSAadPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL 160 ****************98777788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MELDLPGFRF HPTEEELLEF YLKRMIRGKK LQLEVITTIN IYRHDPWELP GTVLSVRLYS 60 LSLSLSLMSI EINGGNCTGL ARIGEREWYF YVPRDRKQAS GGRPSRTTKR GFWKATGSDR 120 PVRSAADPKR LIGLKKTLVY YEGRAPRGTK TDWVMNEYRL PGPPASSSDA PPKEEDIVLC 180 KIYRKAASMK ELEQRAAVAL EEETAASQVS GLVADSSPGW SDQDVFQLKS SYVVEDDVIF 240 TAHTKEVEVR EEAVDVPGAS TRRPCLPELE VPRHEGLEWL QDPFLTQLRS PWMVDLWSPY 300 DPSILNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	3e-79	NAC family protein