PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV84445.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB
Protein Properties Length: 318aa    MW: 36066.7 Da    PI: 6.8601
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV84445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.31.8e-1875122148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+WT eEd+ll ++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
       RWV84445.1  75 RGPWTVEEDLLLMNYIAAHGEGRWNSLARCAGLRRTGKSCRLRWLNYL 122
                      89********************************************97 PP
2Myb_DNA-binding51.42.4e-16128171146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+eE++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++
       RWV84445.1 128 RGNITPEEQLLILELHSRWGNR-WSKIAQFLP-GRTDNEIKNYWRT 171
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MHPITSLYKP HPRHLITPIH TSLLLELSAF VYNPLVSLSP TVAPLRGQLQ ELGEESMEFH  60
GSITPQSEEE MDLRRGPWTV EEDLLLMNYI AAHGEGRWNS LARCAGLRRT GKSCRLRWLN  120
YLRPDVRRGN ITPEEQLLIL ELHSRWGNRW SKIAQFLPGR TDNEIKNYWR TRVQKHAKQL  180
KCDVNSKKFK DVMRYLWMPR LIERIRAASG DATAAVPAAH WTPELAPVNP SPDNSSTAGS  240
SSLQFSPQPL PDSFADYSTW RGGGYSGDVI QPSDFAASWS ESTPSPGGDG HLGLPDFDQI  300
QWGESLWSVE DIWLQQQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.17e-87MYB family protein