PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV84586.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family RAV
Protein Properties Length: 260aa    MW: 29302.8 Da    PI: 8.8435
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV84586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.71.4e-134694155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s+ykGV   + +grW A+I++      ++r++lg+f  + eAa+a++ a ++++g
  RWV84586.1 46 SKYKGVVSQP-NGRWGAQIYEK-----HQRIWLGTFNEEAEAARAYDIAVQRFRG 94
                89****8888.8*********3.....5**********99************998 PP
2B379.82.7e-25178260177
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77 
                 f+k+ tpsdv+k++rlv+pk++ae++      gg   + + l++ed  g++W+++++y+++s +yvlt+GW++Fvk+++L++g
  RWV84586.1 178 FDKAVTPSDVGKLNRLVIPKQHAEKYfplqktGGGASKVVLLRFEDGCGKEWRFRYSYWNSSHSYVLTRGWSRFVKEKRLEAG 260
                 89*************************9999955566888999999999*******************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MATSSIEEAC EETRASKCLQ RVGSGGSEVI DPEGCVEAES RKLPSSKYKG VVSQPNGRWG  60
AQIYEKHQRI WLGTFNEEAE AARAYDIAVQ RFRGRDAITN FKPLNDADDE DAEELFFLDS  120
HAKHEIIEML RKRTYHNELQ QTKRSMGEDN KKGIAARSNA AVAGATDALT GAQRQHLFDK  180
AVTPSDVGKL NRLVIPKQHA EKYFPLQKTG GGASKVVLLR FEDGCGKEWR FRYSYWNSSH  240
SYVLTRGWSR FVKEKRLEAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13260.11e-101RAV family protein