PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV84778.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 646aa MW: 69767.7 Da PI: 7.8779

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV84778.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.9	1.1e-24	127	228	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+ltpsd+++ g +++p+ +a+++ ++++ + ++d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD+vvF+ ++s+++ RWV84778.1 127 FAKILTPSDANNGGGFSVPRFCADSIfprldfnADPPAQ--FILVYDVHGNHWKFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFM--RNSSGQI 221 89*******************999*96555555..6999******************************************..669999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ RWV84778.1 222 LVGIRRT 228 ****996 PP
2	Auxin_resp	62	2.3e-21	277	346	2	70
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdld 70 ++ a + +F+v+Y+ ra++s+Fvv +e ve+a++v+++ GmR++m++eteds++ ++ G v++v+ + RWV84778.1 277 VRLAGMDLPFKVLYYARAGSSDFVVAAEAVEAAMSVRWTTGMRVRMSVETEDSARMTWyEGRVSSVRMHS 346 566777889***********************************************99**998754 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MATEEAAAAP AREMPMVEPQ AWKACAGTAA RIPAVGSLVY YFPQGHAEQA TSRPDFSAFP 60 SLFNAVLCRI SAVRLHANPD TDEVFACISL DPRVPSADVP LPACMTPCSS PSLPEVADGG 120 GGGFVSFAKI LTPSDANNGG GFSVPRFCAD SIFPRLDFNA DPPAQFILVY DVHGNHWKFR 180 HIYRGTPRRH LLTTGWSKFV NSKKLIAGDS VVFMRNSSGQ ILVGIRRTGR FCGPVDYSTC 240 GPPATVLVNR GDHLAGSEGF SSNARGRVPA ASVVAAVRLA GMDLPFKVLY YARAGSSDFV 300 VAAEAVEAAM SVRWTTGMRV RMSVETEDSA RMTWYEGRVS SVRMHSVARA RGQRADEDSG 360 QVLLSSFPLL FPFSSSIDRR RSISPSIDRR RPKSTADGRN QPPTADFRGT ARSTYRSAAG 420 PVTWDEPEIL QNVGNVSPWQ VVLVFAGPQI ESQFSVIKRI KMLESSEFCG DREGDMLFPV 480 RELKGTIVSS LSSSVFSYSV FPAGMQGARH YSIGTPSLCD SIMNTNQTVF NDLHGVNTLR 540 KNDVSVELKI GGISQSGGSS PSQGSSIQVL DRKIPEPESD PVKKTSTGSI QLFGQVIHID 600 QPTNDDANRE YEDTEGGDGS HGSSFHYPHK QLVIQCPRVS AIGACQ

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MATEEAAAAP AREMPMVEPQ AWKACAGTAA RIPAVGSLVY YFPQGHAEQA TSRPDFSAFP  60
SLFNAVLCRI SAVRLHANPD TDEVFACISL DPRVPSADVP LPACMTPCSS PSLPEVADGG  120
GGGFVSFAKI LTPSDANNGG GFSVPRFCAD SIFPRLDFNA DPPAQFILVY DVHGNHWKFR  180
HIYRGTPRRH LLTTGWSKFV NSKKLIAGDS VVFMRNSSGQ ILVGIRRTGR FCGPVDYSTC  240
GPPATVLVNR GDHLAGSEGF SSNARGRVPA ASVVAAVRLA GMDLPFKVLY YARAGSSDFV  300
VAAEAVEAAM SVRWTTGMRV RMSVETEDSA RMTWYEGRVS SVRMHSVARA RGQRADEDSG  360
QVLLSSFPLL FPFSSSIDRR RSISPSIDRR RPKSTADGRN QPPTADFRGT ARSTYRSAAG  420
PVTWDEPEIL QNVGNVSPWQ VVLVFAGPQI ESQFSVIKRI KMLESSEFCG DREGDMLFPV  480
RELKGTIVSS LSSSVFSYSV FPAGMQGARH YSIGTPSLCD SIMNTNQTVF NDLHGVNTLR  540
KNDVSVELKI GGISQSGGSS PSQGSSIQVL DRKIPEPESD PVKKTSTGSI QLFGQVIHID  600
QPTNDDANRE YEDTEGGDGS HGSSFHYPHK QLVIQCPRVS AIGACQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-86	ARF family protein