PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV84815.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 595aa MW: 67870.4 Da PI: 7.7211

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV84815.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.1	9.8e-06	433	462	2	30
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.a 30 r++h r+RR+++ ++f Lr+l+P+ + RWV84815.1 433 RASHVLSQRKRREKLTEKFLVLRSLVPSvS 462 8999***********************944 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MELCVLLVHL HQATRVKKLL PLLSLPSYIW SFNWLERLFR CFFVSVLEWS EGSYHGEIKT 60 RKTTQSTEPD TDQMGLQRSK ELRDLYESLL SGDSNRQIRR PSTSLSPEDL TEAEWYYLLC 120 MSFTFSTGQG YGQHSLLTSL RLPLPLSLVL SRDNRIRKFQ SIVLMKIAYK FNDLDFLTQP 180 CLPFKILEDP ALVKQIASFF HQLPNPVCSD EDMLHPVLDN DRNRSVFSED RKQINICQTH 240 LYASAEQKES VQCKVGEHVV GSSPDSSNDC CPIQQLEDSF GFDWLDGISQ TQNWQFIGDN 300 EFSNALHGSL DTNERVSMSF VNAQRVVSCT VGERSINQML MSPDLDGHDP HHAKTIASIL 360 RNSKHAKPGS CFPRVSHRSS FADWRKSMNT PKPCAREPQE LLKKILMDRA WLSGGHQLKG 420 LPETIWRPEG GARASHVLSQ RKRREKLTEK FLVLRSLVPS VSKELESCRE SVERRKHFDG 480 AERTSGDKEI VNGKRKVCDV HEAETEHHRD GPTTHVTVTV KEKEVSIEMR CPWKEHLLFE 540 IIGSMSNLHL DPLSVQSSTV DGMLALTLES KMRSTAVASP TMIERSLQRV IAKRL

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MELCVLLVHL HQATRVKKLL PLLSLPSYIW SFNWLERLFR CFFVSVLEWS EGSYHGEIKT  60
RKTTQSTEPD TDQMGLQRSK ELRDLYESLL SGDSNRQIRR PSTSLSPEDL TEAEWYYLLC  120
MSFTFSTGQG YGQHSLLTSL RLPLPLSLVL SRDNRIRKFQ SIVLMKIAYK FNDLDFLTQP  180
CLPFKILEDP ALVKQIASFF HQLPNPVCSD EDMLHPVLDN DRNRSVFSED RKQINICQTH  240
LYASAEQKES VQCKVGEHVV GSSPDSSNDC CPIQQLEDSF GFDWLDGISQ TQNWQFIGDN  300
EFSNALHGSL DTNERVSMSF VNAQRVVSCT VGERSINQML MSPDLDGHDP HHAKTIASIL  360
RNSKHAKPGS CFPRVSHRSS FADWRKSMNT PKPCAREPQE LLKKILMDRA WLSGGHQLKG  420
LPETIWRPEG GARASHVLSQ RKRREKLTEK FLVLRSLVPS VSKELESCRE SVERRKHFDG  480
AERTSGDKEI VNGKRKVCDV HEAETEHHRD GPTTHVTVTV KEKEVSIEMR CPWKEHLLFE  540
IIGSMSNLHL DPLSVQSSTV DGMLALTLES KMRSTAVASP TMIERSLQRV IAKRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	441	446	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	4e-74	bHLH family protein