PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV84855.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 515aa MW: 57361 Da PI: 8.4062

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV84855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.9	2.5e-36	182	278	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..ssssasec....eaesssssasnsssg...k 89 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+q+ak+ai++lt++ +a ec e+ ++ s++++s++ + RWV84855.1 182 TGRKDRHSKVYTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIQNAKAAIDQLTELpcHHAPAYECiganEQPMQAASDGHNSIEqslS 278 79**************************************************************775555578865433333333333344433330 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MDSLICPFDG KGRSCGEVEL VELCVYAVIS VKRIGTAKLQ EGIFAFDGGS RNKGTKEPED 60 LWGGVVVLIR RPKRKKTAKR GREFSISPAG VTCVWGLCIY WSVWRWRLSL YLKRKKKRSR 120 SNCITCIADA KAELLLLLCL YLSLCSHRMN ESNRRHCNRR RWRPEFAGEI VEVPGGHIVR 180 STGRKDRHSK VYTAKGLRDR RVRLSAHTAI QFYDVQDRLG YDRPSKAVDW LIQNAKAAID 240 QLTELPCHHA PAYECIGANE QPMQAASDGH NSIEQSLSDA KAVAPLCYGF PSSFDSKTID 300 DTIRPFPCAT AAASSPSTHA MTYRHDTPDL PLHTGCWPQD LRLSLQSFHE PIFQEHHPCP 360 DSTQQSFLSG TTGLAQGATS VTCPVNKEMM VWWNAGNTSD GSGGEFMCSA ALPPQSAALH 420 LVNSQFQMCT QREPLQSSYF PSFRAWRNST TLHPSLVSTV ADAFVSESYS GFSGFNIPTR 480 IEGEEQHNGI ATIHSASPQD YKLRVRDDAN ATLDF

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MDSLICPFDG KGRSCGEVEL VELCVYAVIS VKRIGTAKLQ EGIFAFDGGS RNKGTKEPED  60
LWGGVVVLIR RPKRKKTAKR GREFSISPAG VTCVWGLCIY WSVWRWRLSL YLKRKKKRSR  120
SNCITCIADA KAELLLLLCL YLSLCSHRMN ESNRRHCNRR RWRPEFAGEI VEVPGGHIVR  180
STGRKDRHSK VYTAKGLRDR RVRLSAHTAI QFYDVQDRLG YDRPSKAVDW LIQNAKAAID  240
QLTELPCHHA PAYECIGANE QPMQAASDGH NSIEQSLSDA KAVAPLCYGF PSSFDSKTID  300
DTIRPFPCAT AAASSPSTHA MTYRHDTPDL PLHTGCWPQD LRLSLQSFHE PIFQEHHPCP  360
DSTQQSFLSG TTGLAQGATS VTCPVNKEMM VWWNAGNTSD GSGGEFMCSA ALPPQSAALH  420
LVNSQFQMCT QREPLQSSYF PSFRAWRNST TLHPSLVSTV ADAFVSESYS GFSGFNIPTR  480
IEGEEQHNGI ATIHSASPQD YKLRVRDDAN ATLDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	1e-52	TCP family protein