PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV84961.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 137aa    MW: 13628.5 Da    PI: 9.7378
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV84961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260120.87.7e-3844136192
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 
                 +C aCk+lrrkC ++C++apyf aeq +++fa+vhk+FGasn +kll ++p ++r+da+ +++yeA+ar+rdPvyG+v++i++lqqq+++ k+
  RWV84961.1  44 PCGACKFLRRKCMAGCIFAPYFDAEQgAARFAAVHKVFGASNASKLLLHIPAHKRHDAVITICYEAQARLRDPVYGCVAHIFALQQQVHTPKQ 136
                 7***********************9989************************************************************98665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MSGNVSPSMR VGGGGSGSVG GGLGGGGGGG GGGGGGGGGG GFGPCGACKF LRRKCMAGCI  60
FAPYFDAEQG AARFAAVHKV FGASNASKLL LHIPAHKRHD AVITICYEAQ ARLRDPVYGC  120
VAHIFALQQQ VHTPKQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.17e-52LBD family protein