PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV85133.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 181aa    MW: 19905.3 Da    PI: 10.5167
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV85133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.12e-27116165251
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 ri+n++ rqvtfskRrng++KKA+EL +LCdaev ++ifsstg+ly+++s
  RWV85133.1 116 RIDNSTSRQVTFSKRRNGLMKKAKELAILCDAEVGLVIFSSTGRLYDFAS 165
                 8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MSRCQRSMRR AAGATEVCMH LLVQRNPRQR GGRAIASAVG LSVRPPPAAF SFRFCVQEAV  60
SPPPISCCSR LFFPFPGNLL LLAGCLVVPV ARSADQPAEI ESRGGGMVRG KIVIRRIDNS  120
TSRQVTFSKR RNGLMKKAKE LAILCDAEVG LVIFSSTGRL YDFASTRLYD DSSIFVCYCW  180
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.22e-32MIKC_MADS family protein