PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV85426.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 598aa    MW: 65007.8 Da    PI: 6.3059
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV85426.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS405.93.9e-1241535391374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                 lv+lL++cA+ v+ gd e+a +lL + +    + ++g  + ++a yf+ AL +rl+   + l++a    +++     e    ++ f+e++P++kf+h+t
  RWV85426.1 153 LVHLLVSCADYVQRGDSEMAGSLLGQTRLAlaRVNTGFGIGKVAGYFVDALCRRLYT--PPLSAAGGGGSAA---NPE--ILHHHFYEACPYVKFAHFT 244
                 68**********************99887765788889******************9..6666655444443...233..34457************** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 aNqaIlea++g++rvH++Df++++GlQWpaL+qaLa Rp+gpp lR+Tgvg+p+++ +++l+e+g rLa++A++++v+f f+ ++a+rle +++++++v
  RWV85426.1 245 ANQAILEAFQGHDRVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGVGPPSPDGRDALREVGLRLAELARSVQVRFAFRGVAATRLEHVRPWMFQV 343
                 ************************************************************************************999************ PP

        GRAS 197 kpgEalaVnlvlqlhrll.......desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak...........lpr 277
                  pgEa+aVn vlqlhrll         +++ ++++d+vL  + +l+Pk+v+vveqeadhn++sFl+rf+eal yys++fdsle +            ++
  RWV85426.1 344 APGEAVAVNTVLQLHRLLgdraspeGGDAAAAEPIDTVLAWIVGLKPKIVTVVEQEADHNKPSFLDRFTEALFYYSTMFDSLEGGraggshrgghhHHH 442
                 ******************55555442233344489***********************************************99989999999987667 PP

        GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++++++v +++l+re +n+v+cega+r+erhe l++Wr+rl++aG+++v+l+++a kqa++ll  ++++gy vee +g+l+lgW++rpL+s+SaWr
  RWV85426.1 443 QQQQQQTVAEAYLQREMCNIVCCEGAARVERHEPLARWRDRLGRAGLRAVHLGSNAFKQASMLLTLFSGEGYCVEEADGCLTLGWHGRPLISASAWR 539
                 779999999***************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 598 aa     Download sequence    
MSSSFRSDLG TDPYDSVEDD RWIASASASR GEIDSLLQGA GYRVCSTDLR HVAIGLEQLE  60
SAMVGDQCVA SSGEAIHYNP SDLTAWVDSM LSELAPDPHL PRHPHITATA NTWADPTQQR  120
PSLHGLENHH QHRSVPAVSL QSMDEEEDAA IRLVHLLVSC ADYVQRGDSE MAGSLLGQTR  180
LALARVNTGF GIGKVAGYFV DALCRRLYTP PLSAAGGGGS AANPEILHHH FYEACPYVKF  240
AHFTANQAIL EAFQGHDRVH VVDFNLMHGL QWPALIQALA LRPGGPPLLR LTGVGPPSPD  300
GRDALREVGL RLAELARSVQ VRFAFRGVAA TRLEHVRPWM FQVAPGEAVA VNTVLQLHRL  360
LGDRASPEGG DAAAAEPIDT VLAWIVGLKP KIVTVVEQEA DHNKPSFLDR FTEALFYYST  420
MFDSLEGGRA GGSHRGGHHH HHQQQQQQTV AEAYLQREMC NIVCCEGAAR VERHEPLARW  480
RDRLGRAGLR AVHLGSNAFK QASMLLTLFS GEGYCVEEAD GCLTLGWHGR PLISASAWRA  540
DDDAALPCDH QTLLVLQDHS SSVTSGSNNV VDGDDHHLRQ HSVVRNNDTG SGSSCSRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-126GRAS family protein