PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV85945.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 490aa MW: 54223.2 Da PI: 6.5433

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV85945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.9	2e-06	249	270	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H RWV85945.1 249 FCLICGKGFKRDANLRMHMRGH 270 5*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MMSESPRNLK PDLPFIPFDS TNLWCGDRHG RPFLEFSPPL VTQSNGLFGP DREPKSKSQH 60 EPSPVDDPVM DWNPRLMLSN LSFLEQKIHQ VQEIVRSIIS HEKDQFLDQA NELAAQQQLV 120 TADLTYIIIQ LISTAGTLLP DIKKALLSTN PAVGRPGSNQ KQHEILPVEV AKASQCDSLI 180 KDLNNCGSNE DGLIKCSNNS GIEASEPISI EDHDTKDNDD GMDGENLPPG SYEVLQLEEE 240 EILAPHTHFC LICGKGFKRD ANLRMHMRGH GDEYKSPAAL AKPSKEASIE PQPVRRYSCP 300 FVGCKRNKEH KKFQPLKTIL CVKNHYKRSH CDKSYTCSRC KTKKFSIIAD LKTHEKHCGR 360 DKWICSCGTT FSRKDKLFGH VALFQGHAPA IPMDDAKVLV TSNKAQVSEA SSGMPGNVGY 420 NFSGNTSLDA QSPDIKGVDD GHGCFSPVTL DSCNIWGLPE FPHSAYEVSE STFSFLATGS 480 CSSIQRNGEN

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MMSESPRNLK PDLPFIPFDS TNLWCGDRHG RPFLEFSPPL VTQSNGLFGP DREPKSKSQH  60
EPSPVDDPVM DWNPRLMLSN LSFLEQKIHQ VQEIVRSIIS HEKDQFLDQA NELAAQQQLV  120
TADLTYIIIQ LISTAGTLLP DIKKALLSTN PAVGRPGSNQ KQHEILPVEV AKASQCDSLI  180
KDLNNCGSNE DGLIKCSNNS GIEASEPISI EDHDTKDNDD GMDGENLPPG SYEVLQLEEE  240
EILAPHTHFC LICGKGFKRD ANLRMHMRGH GDEYKSPAAL AKPSKEASIE PQPVRRYSCP  300
FVGCKRNKEH KKFQPLKTIL CVKNHYKRSH CDKSYTCSRC KTKKFSIIAD LKTHEKHCGR  360
DKWICSCGTT FSRKDKLFGH VALFQGHAPA IPMDDAKVLV TSNKAQVSEA SSGMPGNVGY  420
NFSGNTSLDA QSPDIKGVDD GHGCFSPVTL DSCNIWGLPE FPHSAYEVSE STFSFLATGS  480
CSSIQRNGEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-168	C2H2 family protein