PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86006.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 333aa MW: 37092.6 Da PI: 8.5898

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86006.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	305	327	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+k F+++ +L+ H + H RWV86006.1 305 VCPKCSKGFRDPVSLVEHVERdH 327 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MGTPEFPDLG KHCSVDDCRQ IDFLPFTCDR CNQVLKLRGS VFFFFVLLFS LPPFVIASDF 60 PKGNKNSVFD FKKLGFMLLN FGPVLRMMLK YFQVFCLQHR SYISHQCLNA SQKDVTVLIC 120 PICAMGVRLV LDQDPNITWE LHVNTDCDPS NYQRATKKRR CPVPGCKEIL NLSNSIRCSD 180 CTQEHCLKHR FGPDHKCPGP KKLDSGFPFI GLLNRSQKGK PLQSSSSSSS SWWGASLMNA 240 VSNVRVSAES GMLKFSNAAT QALQKAKNGI AESSNSGELM EHGEHAERSH QRSSQPAGNR 300 VTIDVCPKCS KGFRDPVSLV EHVERDHGGT SLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57480.1	9e-87	C2H2 family protein