PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86267.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 360aa MW: 39964.1 Da PI: 6.6305

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86267.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.8	2.5e-10	179	237	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC.........TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkas......kapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f eL ++P + + K++Ka++L A++Y+k+Lq RWV86267.1 179 QEHIMAERKRREKLSQRFIELSAVVPDLKknvspfFFGLWKMDKASVLGDAIKYLKQLQ 237 5799*********************8756666633445****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
FDPEERSPAL VLAVYSSVGE EEPVAMEPLA SPCYSDMVRS FLNQWELTDL DQFSTQQLEL 60 ALGQDLERSP SSESYTSYSS FQPPASTERA KKPIKTSSWS SCTTDKNSAA LSDASCPRIL 120 SFGNPESPLR HSNLSHAVTV KRKEEPDVSI PSKRNYGAMS GDGGTKRGNP GPRPASHNQE 180 HIMAERKRRE KLSQRFIELS AVVPDLKKNV SPFFFGLWKM DKASVLGDAI KYLKQLQEKV 240 TSLQDQVTQR TVESAVLVKK SHLCANDDSS SSDENFDESL PEIEARVCEK TILIKIHCEN 300 RKGILVKSLS EIEKLHLSVT NTSVMPFTNS SLDITVMTQA RFFRPLVPTV SLLSGSSYLV

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

FDPEERSPAL VLAVYSSVGE EEPVAMEPLA SPCYSDMVRS FLNQWELTDL DQFSTQQLEL  60
ALGQDLERSP SSESYTSYSS FQPPASTERA KKPIKTSSWS SCTTDKNSAA LSDASCPRIL  120
SFGNPESPLR HSNLSHAVTV KRKEEPDVSI PSKRNYGAMS GDGGTKRGNP GPRPASHNQE  180
HIMAERKRRE KLSQRFIELS AVVPDLKKNV SPFFFGLWKM DKASVLGDAI KYLKQLQEKV  240
TSLQDQVTQR TVESAVLVKK SHLCANDDSS SSDENFDESL PEIEARVCEK TILIKIHCEN  300
RKGILVKSLS EIEKLHLSVT NTSVMPFTNS SLDITVMTQA RFFRPLVPTV SLLSGSSYLV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	190	ERKRRE
2	186	191	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-46	bHLH family protein