PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86291.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

ARF

Protein Properties

Length: 814aa MW: 90665.9 Da PI: 6.3735

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86291.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.5	2.9e-24	123	224	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l RWV86291.1 123 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIATDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFI--WNDNNQL 217 99***************************8544444..48**********************************************..7777778 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ RWV86291.1 218 LMGIRRA 224 9999997 PP
2	Auxin_resp	118.5	5.3e-39	249	332	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+ dldpv+WpnS+Wrs+k RWV86291.1 249 AAHAAATNSRFTIFYNPRASPSEFVIQLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGIGDLDPVHWPNSHWRSVK 332 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 814 aa Download sequence
MIIPNYVTLD TEEQRSLNSE LWHACAGPLV SLPPVGSRVV YFPQGHSEQV AASTNKEIDS 60 LPSYRSLPPQ LVCQLHNVTM HADVESDEVY AQMTLQPLNP EEQKDTYLPT ELGTASKQPT 120 NYFCKTLTAS DTSTHGGFSV PRRAAEKVFP PLDFSQQPPA QELIATDLHG NEWKFRHIFR 180 GQPKRHLLTT GWSVFVSAKR LIAGDSVLFI WNDNNQLLMG IRRANRPQTV MPSSVLSSDS 240 MHIGLLAAAA HAAATNSRFT IFYNPRASPS EFVIQLAKYV KAVYHTRISV GMRFRMLFET 300 EESSVRRYMG TITGIGDLDP VHWPNSHWRS VKVGWDESTA GERQPRVSLW EIEPLTTFPM 360 YPSPFHFRLK RPWPTGLPSL HGGKDDDFSL SSPVMWLRNG GNPGLQLLNF QSGVTPWMQP 420 RFDTTILGLP PDMYLTVAAD GSQETRTMDP TKQVSSAMLQ FQQIQNTSGI YSPMPPSQLL 480 HHGQSQLPQA FLHNIQLNQV QSQSQPEFIQ HQLQQALQHQ ETQQVPSEAS SRSFLDSNTN 540 CVSTSDASAL HNILSQFSPG EASHLLSWPN PSISQRSVML PPFPGRECAV NQDGNMDARN 600 QLLFGVNIDS SSLLMQNGMT SLCNVDRESD STGMHYATSN FVGSSARDFA LSQALAGSSG 660 LEETGFLQSS QTADQLNQKG GTFVKVSKSG SFGRSLDITR FSSYNELRSE LGRMFGLEGQ 720 LEDPLRSGWQ LVFVDRENDI LLVGDDPWQE FVNNVWCIKI LSPHEVQQMG KQDVNFLNSA 780 PIKMLPSNGC DNYISRQDSR SLSTRVASMG SLER

Sequence ? help Back to Top

Protein Sequence Length: 814 aa Download sequence

MIIPNYVTLD TEEQRSLNSE LWHACAGPLV SLPPVGSRVV YFPQGHSEQV AASTNKEIDS  60
LPSYRSLPPQ LVCQLHNVTM HADVESDEVY AQMTLQPLNP EEQKDTYLPT ELGTASKQPT  120
NYFCKTLTAS DTSTHGGFSV PRRAAEKVFP PLDFSQQPPA QELIATDLHG NEWKFRHIFR  180
GQPKRHLLTT GWSVFVSAKR LIAGDSVLFI WNDNNQLLMG IRRANRPQTV MPSSVLSSDS  240
MHIGLLAAAA HAAATNSRFT IFYNPRASPS EFVIQLAKYV KAVYHTRISV GMRFRMLFET  300
EESSVRRYMG TITGIGDLDP VHWPNSHWRS VKVGWDESTA GERQPRVSLW EIEPLTTFPM  360
YPSPFHFRLK RPWPTGLPSL HGGKDDDFSL SSPVMWLRNG GNPGLQLLNF QSGVTPWMQP  420
RFDTTILGLP PDMYLTVAAD GSQETRTMDP TKQVSSAMLQ FQQIQNTSGI YSPMPPSQLL  480
HHGQSQLPQA FLHNIQLNQV QSQSQPEFIQ HQLQQALQHQ ETQQVPSEAS SRSFLDSNTN  540
CVSTSDASAL HNILSQFSPG EASHLLSWPN PSISQRSVML PPFPGRECAV NQDGNMDARN  600
QLLFGVNIDS SSLLMQNGMT SLCNVDRESD STGMHYATSN FVGSSARDFA LSQALAGSSG  660
LEETGFLQSS QTADQLNQKG GTFVKVSKSG SFGRSLDITR FSSYNELRSE LGRMFGLEGQ  720
LEDPLRSGWQ LVFVDRENDI LLVGDDPWQE FVNNVWCIKI LSPHEVQQMG KQDVNFLNSA  780
PIKMLPSNGC DNYISRQDSR SLSTRVASMG SLER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.1	0.0	ARF family protein