PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV86374.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C2H2
Protein Properties Length: 358aa    MW: 37708.2 Da    PI: 8.2267
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV86374.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00035184206123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ Cgk F++   L  H  +H
  RWV86374.1 184 YECSVCGKAFPSYQALGGHKTSH 206
                 99**********99998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MCPLCYLVPP RHDVHHTALF RHRTPNQSFF ASRLKSLYDY YSFVGGTLSP HPTTSHGNDA  60
SDDDSRIPVG PRFIQSQSSE KENKDLMAVD AVEETPSPSP SSSPPPPPYQ VGSTTKGKRS  120
KRPRPSPSSS PEVPDEDADR RRLNTEEEFY ALCLVMLSRG AGGGAAFEQE HVPPRPPPPK  180
AQSYECSVCG KAFPSYQALG GHKTSHRKPA ATTAAAGGDD AASVSNGGGG APVVVAGALG  240
KPHECSVCHK SFPTGQALGG HMRCHYDGRA TAGTGMTATA ASSSGAASSG RDRGFDLNRP  300
PRPQLPETGL VGTLSGARKE EGEEALSPLL LAPKKPRLLA AAVKADMEPP LPTLISFI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121125KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49930.13e-29C2H2 family protein