PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV86480.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C2H2
Protein Properties Length: 107aa    MW: 12610.6 Da    PI: 10.5747
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV86480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000157092123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                +kC +C+k +  +s+ k H + +
  RWV86480.1 70 WKCDKCSKKYAVQSDWKAHSKIC 92
                58*****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
KGFQRDQNLQ LHRRGHNLPW KLKQRSSKEV RKKVYICPEV TCVHHDPSRA LGDLTGIKKH  60
FSRKHGEKKW KCDKCSKKYA VQSDWKAHSK ICGTKEYRCD CGTLFSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12133KLKQRSSKEVRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66730.13e-64C2H2 family protein