PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86498.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 353aa MW: 37841 Da PI: 8.1509

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.1	4.5e-40	53	144	1	91
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaa 91 +a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++++ RWV86498.1 53 PAPKRSSNKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSVSAPSHL 144 589*******************************************************************9998666666666644444222 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MEGEPGGSRR PNFPLQLLEK KEEDSCSSSA YPSLAISSTT AAGELAAERL RKPAPKRSSN 60 KDRHTKVEGR GRRIRMPALC AARVFQLTRE LGHKTDGETI EWLLQQAEPA VIAATGTGTI 120 PANFTSLNIS LRSSGSSVSA PSHLRAANYF GGVAAAHPGT SFRFHNEWER GGSSAFPPEG 180 PSSSSSVLLN FNSCSIGLDA SSEGDIGNIR KRRWESEIHQ HQPPPVQHQM AGYSQASHGQ 240 MPGTVWMVTN PNAQDMVGSS NQSIWTFPQA SNASMLRGSM SGGLHFMNIP TPMALLPSQQ 300 LGLGSGGSEG YTGIPSALNM YRSSPSNSEA MQSMTQQSHR DSERHDTMST SDS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MEGEPGGSRR PNFPLQLLEK KEEDSCSSSA YPSLAISSTT AAGELAAERL RKPAPKRSSN  60
KDRHTKVEGR GRRIRMPALC AARVFQLTRE LGHKTDGETI EWLLQQAEPA VIAATGTGTI  120
PANFTSLNIS LRSSGSSVSA PSHLRAANYF GGVAAAHPGT SFRFHNEWER GGSSAFPPEG  180
PSSSSSVLLN FNSCSIGLDA SSEGDIGNIR KRRWESEIHQ HQPPPVQHQM AGYSQASHGQ  240
MPGTVWMVTN PNAQDMVGSS NQSIWTFPQA SNASMLRGSM SGGLHFMNIP TPMALLPSQQ  300
LGLGSGGSEG YTGIPSALNM YRSSPSNSEA MQSMTQQSHR DSERHDTMST SDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	5e-49	TCP family protein