PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86724.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MIKC_MADS

Protein Properties

Length: 163aa MW: 18887.8 Da PI: 9.2808

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.6	4e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqv+f+kRr g+lKKA+ELSvLCdaeva+i+fs +g+l+e++s RWV86724.1 9 KRIENKINRQVSFAKRRCGLLKKAHELSVLCDAEVALIVFSAHGRLFEFCS 59 79***********************************************96 PP
2	K-box	21	1.4e-08	102	135	65	98
K-box 65 iRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++++l+q+ +l++ke+elq++nk+Lr+k+ RWV86724.1 102 SSEAQMQIMLDQLYDLKNKEQELQKDNKNLRRKV 135 56889***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MGRGKVELKR IENKINRQVS FAKRRCGLLK KAHELSVLCD AEVALIVFSA HGRLFEFCST 60 SRYICAHVRP WLEAPLLYLV SMLKTIERYQ MFRNNAESIP TSSEAQMQIM LDQLYDLKNK 120 EQELQKDNKN LRRKVLSSQS CTAPSNDDEG AARDDDRLIP RWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03710.3	3e-36	MIKC_MADS family protein