PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86726.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

WOX

Protein Properties

Length: 213aa MW: 23784.4 Da PI: 8.4376

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.6	1.4e-20	16	75	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ +Le l+++ r+psa+++++++ kl +++ ++V++WFqN++a++++ RWV86726.1 16 SRWNPTKEQISVLEGLYKQgIRTPSADQIQHITGKLreygNIEGKNVFYWFQNHKARQRQ 75 8***************99************************************97 PP
2	Wus_type_Homeobox	116.3	1.5e-37	14	77	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+Pt+eQi +Le lyk+G+rtP++++iq+it +L+eyG+ie+kNVfyWFQN+kaR+rqkq RWV86726.1 14 SSSRWNPTKEQISVLEGLYKQGIRTPSADQIQHITGKLREYGNIEGKNVFYWFQNHKARQRQKQ 77 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MEGGKGSSSS SSPSSSRWNP TKEQISVLEG LYKQGIRTPS ADQIQHITGK LREYGNIEGK 60 NVFYWFQNHK ARQRQKQKQE SFAYLSRLLQ LGFSPYYVPV PQVGGVGFYH PQFPNVIFPA 120 AAKRTDFQKT AMIHEINQTP SRAGCRNRDE SGHETLQLFP LHPTGLLERR SGSTPTSASA 180 ETESVEEAEG EEEVGGENQQ PLFNFFGGAN KQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	2e-39	WOX family protein