PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV86885.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family NF-YA
Protein Properties Length: 211aa    MW: 23164.5 Da    PI: 10.181
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV86885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA75.61e-2314102258
   CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekk................................ldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  p+YVNaKQ+++Il+RR++Ra++e+e+k                                +  +  +pylheSRh hAlrR Rg++GrF
  RWV86885.1  14 GPIYVNAKQFNAILRRRKARAMAEKENKsikvrkvcisydtkkilriigsdflvyfeclkIGFTFLQPYLHESRHIHALRRVRGCSGRF 102
                 7*********************************************************99556789**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
HGRMLLPMAV ATQGPIYVNA KQFNAILRRR KARAMAEKEN KSIKVRKVCI SYDTKKILRI  60
IGSDFLVYFE CLKIGFTFLQ PYLHESRHIH ALRRVRGCSG RFVNTKKEGN GGCKVKEWMP  120
SQPANFEARS ETLHSGNLKM NSASSRSSAS GSEVTSVCAR EDIGDFHIVD NQSPSGFSSH  180
LSMTNGGQGA SIGGRWGAAA DGCCDPDLLK V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14020.15e-17NF-YA family protein