PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV86976.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 277aa MW: 29231.8 Da PI: 8.4881

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV86976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0016	123	145	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H RWV86976.1 123 YECKTCNKCFPSFQALGGHRTSH 145 99*********999998888777 PP
2	zf-C2H2	13.8	0.00017	192	214	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H RWV86976.1 192 HECSICGSEFSSGQALGGHMRRH 214 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MAYSNSSDNE SNNEFVHAVV KGKRTKRQRT QPPPVLSVAV ADSLSASSAE AASGIVTEEE 60 EDMANCLILL AQGRTLDAGP NLEEQKSDAG GVVAGGSGSE RFTSRRLAEA ATTTNGKAGL 120 YVYECKTCNK CFPSFQALGG HRTSHKKTRL AAGTTAEEKK LAVGDDLLRI SMNSFSKPIA 180 GSGQTNTKPK VHECSICGSE FSSGQALGGH MRRHRPLGAA DGQEAKKDKS FISLDLNLPA 240 PADDGLQRPP SPTLALASKR PLIFRASASA LVVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	6e-44	C2H2 family protein