PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87040.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 311aa MW: 33446.5 Da PI: 4.9071

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.6	9e-11	14	45	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd++lvd+++ +G g+W++ ++ g RWV87040.1 14 KGPWTPEEDKILVDYIQSHGHGSWRSLPKLAG 45 79*************************99987 PP
2	Myb_DNA-binding	22	3.9e-07	74	110	11	48
HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ll++a ++ +t + I++ ++ gRt++++k++w+++l RWV87040.1 74 LLIHALALQSQPTMEYISAQLP-GRTDNEIKNFWNTHL 110 788999999999999*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MGRAPCCDKS GLKKGPWTPE EDKILVDYIQ SHGHGSWRSL PKLAGLSPIL LLLSFKYQTC 60 YFPSSQLISF SCLLLIHALA LQSQPTMEYI SAQLPGRTDN EIKNFWNTHL KKRLLRMGLL 120 HPDPSDTSPA AAASRHMAQW EGARLEAEAR LSRESLFAHS ASAAAAAAVT NLSVNLPPLK 180 PEPDFFLRIW NSNVGDAFRK TAAASATGES SPESSFTRQS SAAVVKTEPP PAAREETESK 240 SCVTGSGPPV VAGMDDSSGS NDVVDDVSEE SYQLYLDFGS GDDDLGLFGG QVGAFSSLFC 300 SDLNVETSLD C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	2e-50	MYB family protein