PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87074.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 331aa MW: 37024.7 Da PI: 5.2156

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.7	6.3e-21	46	102	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+ qVk+WFqN+R+++k+ RWV87074.1 46 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKR 102 678899*************************************************97 PP
2	START	37.5	5.7e-13	232	310	1	69
HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCG CS START 1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddk 69 ela +a++el+++a+++ep+W e +n++e++++f+++ + ++ea+r+++vv+m+++++ve+l+d+ RWV87074.1 232 ELAVAAMEELIRMAQLNEPLWIPAGldnatEALNEEEYVRTFPRGIGprpfgLKSEASRETAVVIMNQMNVVEILMDVV 310 57899**************998888999**********999***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MEIAPTTTGE SEMPRAREDD FESKSGSENI EVASGDDQDQ NQRPRKKRYH RHTQHQIQEM 60 EAFFKECPHP DDKQRKELSR ELGLEPLQVK FWFQNKRTQM KRQENNQLRA ENERLRDENL 120 RYKEGLSNAS CPNCGGPASL GEMSFDEHHL RIENARLREE IDRISGIAAK YVGKPMASYP 180 LLSPPVPSRP PLDLGVGGFG GQQGVGVEMF GPGELMRSVS GAADTDKPMV VELAVAAMEE 240 LIRMAQLNEP LWIPAGLDNA TEALNEEEYV RTFPRGIGPR PFGLKSEASR ETAVVIMNQM 300 NVVEILMDVV RNVAVLAGAS EKKAQSNHTC A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04890.1	1e-139	HD-ZIP family protein