PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV87075.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 228aa    MW: 25604.4 Da    PI: 10.8364
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV87075.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.94.9e-27253151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-E.EEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdae.vaviifsstgklyeyss 51
                krien + rqvtfskRr+g+lKKA+ELSvLCd+e va+iifss++klye++s
  RWV87075.1  2 KRIENATSRQVTFSKRRTGLLKKAFELSVLCDVEkVALIIFSSRDKLYEFAS 53
                79*******************************66***************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MKRIENATSR QVTFSKRRTG LLKKAFELSV LCDVEKVALI IFSSRDKLYE FASSRWYDAA  60
AYSATLTLAL VPRLMAREKG KLNNLTTPPP QRTTMTASGF SLGIEGGLVC VGKGGRRREE  120
ARDVRPVSCT HWSGDDPSGR GRVGHLCTRS FAFAVLRDQG FLLPTRRWDP RWKHSLPPLS  180
IWCFLAGPRQ SSRSGGGPAT AIGYFLDETE LTTNLDRYRK NRKHLEIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.11e-24MIKC_MADS family protein