PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87135.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 190aa MW: 20783.3 Da PI: 8.4909

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	75.1	1.2e-23	130	181	1	52
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEET CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhel 52 +CqvegC adls+ k+yhrrhkvCe+h+ka++++v++ qrfCqqCsr +l RWV87135.1 130 TCQVEGCGADLSDSKDYHRRHKVCEMHAKASSAVVRNAIQRFCQQCSRLVQL 181 6***********************************************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
LASVVIGVVE ASRRLVRNYR GHKLGEIFGS ESHQYFAAGT SNLNGIGKKS VEWDLNDWRW 60 DGGFDLSIVE NGKGEAEKRR RIVVVEEDES YGGSGSLSLK LGGHAFPVME ADLANGKKSK 120 PQGGSPSHST CQVEGCGADL SDSKDYHRRH KVCEMHAKAS SAVVRNAIQR FCQQCSRLVQ 180 LIHSIGTHYV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	82	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	2e-29	SBP family protein