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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV87195.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | CPP | ||||||||
| Protein Properties | Length: 381aa MW: 42284.8 Da PI: 6.4287 | ||||||||
| Description | CPP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | TCR | 21.3 | 5.4e-07 | 21 | 49 | 13 | 42 |
TCR 13 ClkkYCeCfaagkkCseeCkCedCkNkeek 42
C +YCeCfa+g++C+ C+C++C+N+ e+
RWV87195.1 21 CTLRYCECFASGVYCDG-CNCSNCCNNVEN 49
999**************.********9875 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 381 aa Download sequence |
MAVIFMFFLN LLIVLMLFHY CTLRYCECFA SGVYCDGCNC SNCCNNVENE AARHEAVEAT 60 LERNPNAFRP KIGSSPHASR DGRVCTQSSI RMNFDFLLGF FHKVHAYYAN ISGTSYTYQA 120 KTSSPASFSA STPSAISTTP MASTKVIYRK VEEKLAEMES QVESAVLPSE QEIDQRQKDG 180 ERQKASADEH SSEIPAEKTS AEESESDCGD GQKGGRPMSP GTLALLCDEQ DTVFMTSQAT 240 GTAPRSSNNH NTSEVYAEQE RCVLTEFRDY LLKLVTYGRM KDQVDYKNLL PCVVALHILA 300 LIHYYLIYAE EKYSSMSSKC KASPCHMVSA PNGVARAAVP VAVEKSQTMR RVPHNSNKYP 360 PVEQQTVGNG DIKPKIEKPE M |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G20110.1 | 5e-21 | CPP family protein | ||||




